Photo: Iftekhar Naim

SWALO (scaffolding with assembly likelihood optimization) is a method for scaffolding based on likelihood of genome assemblies computed using generative models for sequencing.


SWALO is described in the paper
Atif Rahman and Lior Pachter, SWALO: scaffolding with assembly likelihood optimization, submitted.

Please check the Git repository of SWALO for the latest version at https://github.com/atifrahman/SWALO.

Please email your questions, comments, suggestions, and bug reports to atif.bd@gmail.com.